Computational Biology and Informatics Lab (CBIL)
Benchmarker for Evaluating the Effectiveness of RNA-Seq Software (BEERS)
Patterns from Gene Expression (PaGE)
Significance Tester for the Accumulation of Reads (STAR - This is no longer available)
Clustering of Genes into Regulons using Integrated Modeling (COGRIM)
Microarray Gene Expression Simulator (GSIM - This is no longer available)
Multiple Sample Analysis (MSA)
Significance Testing for Aberrant Copy-Number (STAC)
Transcription Element Search System (TESS)
t-statistics, p-values, and Westfall and Young step-down method (tpWY - This is no longer available)
Un-Paired Series Interrogator for a Dampening Effect (UPSIDE - This is no longer available)